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AMAP is a multiple sequence alignment program based on sequence annealing. This approach consists of building up the multiple alignment one match at a time, thereby circumventing many of the problems of progressive alignment. The AMAP parameters can be used to tune the sensivitiy-specificity tradeoff. The program can be used through the AMAP web server or as a standalone program which can be installed with the source code.

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amanori, amanous, amantillo, amanuenses, amanuensis, amapa, amapondo, amar, amara, amarantaceae

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